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Python utility to help you extract data from Excel files and load into a predefined list field for a specific REDCAP Project

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REDCAP ETL TRANSFORMATION

Python utility to help you extract data from Excel files and load into a predefined list field for a specific REDCAP Project
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About The Project

Data transformation from your base data is executed by this utility, a simple Python file which gets 2 files as parameters, first, the data file with the whole database , lets say "SampleData.xlsx" and the template file in csv downloaded from your project field settings. In order to get it ready to be uploaded , the template's next row will be filled with those mapping field names from the initial dataset in Excel.

Then,

  • Second row is supposed to have field names to establish the relationship
  • Some basic formulas are supported (ex, "if subcont_biv=1,1")

Built With

Pandas & Numpy libraries are supported

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Python utility to help you extract data from Excel files and load into a predefined list field for a specific REDCAP Project

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