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1. biobakery/phylophlan biobakery/phylophlan Public

   Precise phylogenetic analysis of microbial isolates and genomes from metagenomes

   Python 127 33

2. biobakery/graphlan biobakery/graphlan Public

   High-quality circular representations of taxonomic and phylogenetic trees

   Python 88 28

3. SegataLab/preprocessing SegataLab/preprocessing Public

   Raw sequence metagenomic reads pre-processing: trimming, QC, and host contamination

   Python 9 3

4. SegataLab/export2graphlan SegataLab/export2graphlan Public

   Conversion software tool for producing both annotation and tree files for GraPhlAn

   Python 8 6

5. biobakery/MetaPhlAn biobakery/MetaPhlAn Public

   MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data

   Python 302 86

6. screenrc screenrc Public