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5.2.0 update to master #98

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merged 58 commits into from
Jan 16, 2025
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7e07d62
Create pytype_and_pytest.yml
erik-brink Jun 27, 2024
203df1f
Update pytype_and_pytest.yml
erik-brink Jun 27, 2024
7168360
Update pytype_and_pytest.yml
erik-brink Jun 27, 2024
4070e7f
Update pytype_and_pytest.yml
erik-brink Jun 27, 2024
0fb3eb6
Update pyproject.toml
erik-brink Nov 28, 2024
5401526
Fix endpoint parsing problem
erik-brink Nov 28, 2024
1dbd90f
Update .gitignore
erik-brink Dec 4, 2024
a412186
Update hcp.py
erik-brink Dec 11, 2024
97a3384
Update pyproject.toml
erik-brink Dec 12, 2024
bf1ed2e
Update pyproject.toml
erik-brink Dec 12, 2024
8f3ed95
Update __init__.py
erik-brink Dec 13, 2024
e080ba6
Update README.md
erik-brink Dec 13, 2024
74696cb
Update Tutorial.md
erik-brink Dec 13, 2024
c2031c4
Add fuzzy search
erik-brink Dec 13, 2024
ed4d26f
Update hcp.py
erik-brink Dec 13, 2024
a7785cb
Make `search_objects_in_bucket` use generators
erik-brink Dec 13, 2024
c2566ac
Update hcp.py
erik-brink Dec 13, 2024
afaba28
Update __init__.py
erik-brink Dec 16, 2024
b3df429
Add fuzzy search command
erik-brink Dec 16, 2024
8556ecc
Fix `delete_objects` and `delete_folder`
erik-brink Dec 16, 2024
6fe3673
Update pyproject.toml
erik-brink Dec 17, 2024
5bb4905
Update hcp.py
erik-brink Dec 17, 2024
63831af
Update __init__.py
erik-brink Dec 17, 2024
579656b
Update hcp.py
erik-brink Dec 17, 2024
6fadbf7
Update __init__.py
erik-brink Dec 17, 2024
9b7cbd6
Update hcp.py
erik-brink Dec 17, 2024
d201317
Update hcp.py
erik-brink Dec 17, 2024
90b04ac
Update hcp.py
erik-brink Dec 17, 2024
5ef6380
Update pyproject.toml
erik-brink Dec 17, 2024
5ae8243
Update __init__.py
erik-brink Dec 18, 2024
51aeb45
Update pyproject.toml
erik-brink Dec 18, 2024
421fae9
Fix single file upload
erik-brink Dec 18, 2024
fa521ab
Update hcp.py
erik-brink Dec 18, 2024
4cee7fd
Update hcp.py
erik-brink Dec 18, 2024
50dcf99
Replace `pytype_and_pytest.yml` with just `pytype.yml`
erik-brink Jan 3, 2025
0f39a8f
Update pytype.yml
erik-brink Jan 3, 2025
d9dce1f
Create pytest.yml
erik-brink Jan 3, 2025
e42c74c
Revert "Create pytest.yml"
erik-brink Jan 3, 2025
7b48278
Update test_conf_template.ini
erik-brink Jan 7, 2025
2bc7574
Update test suites
erik-brink Jan 7, 2025
ce06102
Update conftest.py
erik-brink Jan 7, 2025
3cc69e3
Update test_hcp.py
erik-brink Jan 7, 2025
9cc5dbc
Add `DynamicConfig` for making the test suite a little more type safe
erik-brink Jan 7, 2025
9e3e690
Merge pull request #95 from genomic-medicine-sweden/automated-pytype
erik-brink Jan 8, 2025
49dd223
Update conftest.py
erik-brink Jan 8, 2025
8d7108f
Fix type safety
erik-brink Jan 8, 2025
7e760fa
Update conftest.py
erik-brink Jan 8, 2025
8a45c71
Update test_hcp.py
erik-brink Jan 8, 2025
26b0da6
Update test_hcp.py
erik-brink Jan 8, 2025
720d1ba
Fix `_without_mounting `
erik-brink Jan 8, 2025
7403711
Update pyproject.toml
erik-brink Jan 9, 2025
680588a
Merge pull request #94 from genomic-medicine-sweden/dev-better-simple…
erik-brink Jan 15, 2025
34fd75d
Merge branch 'dev' into dev-5.2.0-update
erik-brink Jan 15, 2025
443496b
Merge pull request #97 from genomic-medicine-sweden/dev-5.2.0-update
erik-brink Jan 15, 2025
eef3e86
Update test_hcp.py
erik-brink Jan 16, 2025
95619ea
Update test_conf_template.ini
erik-brink Jan 16, 2025
a6a2a63
Move teardown logic to `conftest.py`
erik-brink Jan 16, 2025
fe06490
Merge pull request #96 from genomic-medicine-sweden/dev-update-tests
erik-brink Jan 16, 2025
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Update pytype_and_pytest.yml
erik-brink committed Jun 27, 2024
commit 4070e7f7b6755cbf192abc9c55a838d657489057
2 changes: 1 addition & 1 deletion .github/workflows/pytype_and_pytest.yml
Original file line number Diff line number Diff line change
@@ -11,7 +11,7 @@ permissions:
contents: read

jobs:
build:
pytype_and_pytest:

runs-on: ubuntu-latest