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Gerstein Lab

Popular repositories Loading

  1. ML-Bench ML-Bench Public

    The Official Repo of ML-Bench: Evaluating Large Language Models and Agents for Machine Learning Tasks on Repository-Level Code (https://arxiv.org/abs/2311.09835)

    Python 353 9

  2. MedAgents MedAgents Public

    Python 215 28

  3. ThermoNet ThermoNet Public

    ThermoNet is a computational method for quantitative prediction of the impact of single-point mutations on protein thermodynamic stability. The core algorithm of ThermoNet is an ensemble of deep 3D…

    Python 108 20

  4. GenAI4Drug GenAI4Drug Public

    57 4

  5. Struc-Bench Struc-Bench Public

    Python 42 5

  6. BioCoder BioCoder Public

    Jupyter Notebook 37 11

Repositories

Showing 10 of 119 repositories
  • MIMIR Public
    gersteinlab/MIMIR’s past year of commit activity
    Python 1 0 0 0 Updated Nov 10, 2024
  • gersteinlab/ProteinGraph_construction’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Nov 5, 2024
  • gersteinlab/cbb752b25’s past year of commit activity
    CSS 0 0 0 0 Updated Oct 31, 2024
  • BC-Design Public

    BC-Design: A Biochemistry-Aware Framework for High-Precision Inverse Protein Folding

    gersteinlab/BC-Design’s past year of commit activity
    Python 4 Apache-2.0 0 1 0 Updated Oct 30, 2024
  • ML-Bench Public

    The Official Repo of ML-Bench: Evaluating Large Language Models and Agents for Machine Learning Tasks on Repository-Level Code (https://arxiv.org/abs/2311.09835)

    gersteinlab/ML-Bench’s past year of commit activity
    Python 353 MIT 9 0 0 Updated Oct 1, 2024
  • PPT Public
    gersteinlab/PPT’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Sep 16, 2024
  • gersteinlab/GraphPartition_SBGNN’s past year of commit activity
    Python 2 MIT 0 0 0 Updated Aug 20, 2024
  • gersteinlab/entexBERT-paper’s past year of commit activity
    Python 1 0 0 0 Updated Aug 17, 2024
  • chronODE Public
    gersteinlab/chronODE’s past year of commit activity
    Jupyter Notebook 3 0 0 0 Updated Aug 13, 2024
  • gersteinlab/step-back-profiling’s past year of commit activity
    Jupyter Notebook 3 MIT 0 0 0 Updated Aug 2, 2024