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Robert J. Gifford edited this page Sep 27, 2024 · 1 revision

The HCV-GLUE core project provides a minimal set of essential data components for performing comparative genomic analysis of parvoviruses.

The data items included in the core project are:

  1. A set of HCV genome feature definitions covering all genera.

  2. An annotated reference genome sequence for each HCV genotype and subtype (i.e. one species per genus).

  3. A hierarchically arranged set of multiple sequence alignments representing sequence homology among HCV reference sequences.

Overview & Installation

  1. Home
  2. Background
  3. Requirements
  4. Installation

GLUE Concepts

  1. Project Data Model
  2. Interacting with Projects
  3. Alignment Tree Concept

Base Project

  1. Overview
  2. Database Schema
  3. Genome Features
  4. Sequence Data
  5. Alignments
  6. Phylogenetic Trees
  7. Genotyping Tools
  8. Deep Sequencing Data Analysis

Web Implementation

  1. About the Web Version
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