updated festim version to newest fenicsx surface-reactions committ, a…

…ddresses issue #34
kaelyndunnell · Nov 4, 2024 · 425657a · 425657a
1 parent 079a37a
commit 425657a
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Showing 3 changed files with 10 additions and 10 deletions.
diff --git a/environment.yml b/environment.yml
@@ -10,5 +10,5 @@ dependencies:
   - pint # need to install pint with conda to avoid conflicts (HTM)
   - pip
   - pip:
-      - git+https://github.com/remdelaportemathurin/FESTIM@ad3b10b1a0c736ea3cd1e77835ef70de82208a10
+      - git+https://github.com/festim-dev/FESTIM@9203ac7fe1a5039545df1ff287d5497252b13e48
       - h_transport_materials~=0.16
diff --git a/pyproject.toml b/pyproject.toml
@@ -15,7 +15,7 @@ requires-python = ">=3.9"
 license = { file = "LICENSE" }
 dependencies = [
     "h_transport_materials",
-    "festim@git+https://github.com/remdelaportemathurin/FESTIM@ad3b10b1a0c736ea3cd1e77835ef70de82208a10"]
+    "festim@git+https://github.com/festim-dev/FESTIM@9203ac7fe1a5039545df1ff287d5497252b13e48"]
 
 classifiers = [
     "Natural Language :: English",

diff --git a/src/hisp/festim_models/mb_model.py b/src/hisp/festim_models/mb_model.py
@@ -247,14 +247,14 @@ def make_mb_model(
     ############# Exports #############
 
     my_model.exports = [
-        F.VTXExport(f"{folder}/mobile_concentration_t.bp", field=mobile_T),
-        F.VTXExport(f"{folder}/mobile_concentration_d.bp", field=mobile_D),
-        F.VTXExport(f"{folder}/trapped_concentration_d1.bp", field=trap1_D),
-        F.VTXExport(f"{folder}/trapped_concentration_t1.bp", field=trap1_T),
-        F.VTXExport(f"{folder}/trapped_concentration_d2.bp", field=trap2_D),
-        F.VTXExport(f"{folder}/trapped_concentration_t2.bp", field=trap2_T),
-        F.VTXExport(f"{folder}/trapped_concentration_d3.bp", field=trap3_D),
-        F.VTXExport(f"{folder}/trapped_concentration_t3.bp", field=trap3_T),
+        F.VTXSpeciesExport(f"{folder}/mobile_concentration_t.bp", field=mobile_T),
+        F.VTXSpeciesExport(f"{folder}/mobile_concentration_d.bp", field=mobile_D),
+        F.VTXSpeciesExport(f"{folder}/trapped_concentration_d1.bp", field=trap1_D),
+        F.VTXSpeciesExport(f"{folder}/trapped_concentration_t1.bp", field=trap1_T),
+        F.VTXSpeciesExport(f"{folder}/trapped_concentration_d2.bp", field=trap2_D),
+        F.VTXSpeciesExport(f"{folder}/trapped_concentration_t2.bp", field=trap2_T),
+        F.VTXSpeciesExport(f"{folder}/trapped_concentration_d3.bp", field=trap3_D),
+        F.VTXSpeciesExport(f"{folder}/trapped_concentration_t3.bp", field=trap3_T),
     ]
 
     quantities = {}