update publications

_data/publications/2023-10-20-Ashraf.yml

@@ -0,0 +1,6 @@
+title: "Allele detection using k -mer-based sequencing error profiles"
+authors: Ashraf H, Ebler J, Marschall T
+text: https://doi.org/10.1093/bioadv/vbad149
+date: "2023-10-20"
+journal: Bioinformatics Advances
+pubmed: 37928341

_data/publications/2023-05-04-Harvey.yml → _data/publications/2023-12-07-Harvey.yml

@@ -1,6 +1,6 @@
-title: "Whole-genome long-read sequencing downsampling and its effect on variant calling precision and recall"
+title: "Whole-genome long-read sequencing downsampling and its effect on variant-calling precision and recall"
 authors: Harvey WT, Ebert P, Ebler J, Audano PA, Munson KM, Hoekzema K, Porubsky D, Beck CR, Marschall T, Garimella K, Eichler EE
-text: https://doi.org/10.1101/2023.05.04.539448
-date: "2023-05-04"
-journal: bioRxiv
-pubmed: 37205567
+text: https://doi.org/10.1101/gr.278070.123
+date: "2023-12-07"
+journal: Genome Research
+pubmed: 38190646

_data/publications/2024-01-19-Mari.yml

@@ -0,0 +1,6 @@
+title: "Haplotype-resolved assembly of a tetraploid potato genome using long reads and low-depth offspring data"
+authors: Serra Mari R, Schrinner S, Finkers R, Ziegler FMR, Arens P, Schmidt MH, Usadel B, Klau GW, Marschall T
+text: https://doi.org/10.1186/s13059-023-03160-z
+date: "2024-01-19"
+journal: Genome Biology
+pubmed: 38243222

_data/publications/2024-02-16-Henglin.yml

@@ -0,0 +1,6 @@
+title: "Phasing Diploid Genome Assembly Graphs with Single-Cell Strand Sequencing"
+authors: Henglin M, Ghareghani M, Harvey W, Porubsky D, Koren S, Eichler E, Ebert P, Marschall T
+text: https://doi.org/10.1101/2024.02.15.580432
+date: "2024-02-16"
+journal: bioRxiv
+pubmed: 38529499

_data/publications/2024-03-20-Plender.yml

@@ -0,0 +1,6 @@
+title: "Structural and genetic diversity in the secreted mucins, MUC5AC and MUC5B"
+authors: Plender E, Prodanov T, Hsieh P, Nizamis E, Harvey W, Sulovari A, Munson K, Kaufman E, O'Neal W, Valdmanis P, Marschall T, Eichler E
+text: https://doi.org/10.1101/2024.03.18.585560
+date: "2024-03-20"
+journal: bioRxiv
+pubmed: 38562829

_data/publications/2024-04-20-Schloissnig.yml

@@ -0,0 +1,6 @@
+title: "Long-read sequencing and structural variant characterization in 1,019 samples from the 1000 Genomes Project"
+authors: Schloissnig S, Pani S, Rodriguez-Martin B, Ebler J, Hain C, Tsapalou V, Söylev A, Hüther P, Ashraf H, Prodanov T, Asparuhova M, Hunt S, Rausch T, Marschall T, Korbel J
+text: https://doi.org/10.1101/2024.04.18.590093
+date: "2024-04-20"
+journal: bioRxiv
+pubmed: 38659906