Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Update developer docs to ensure compatibility with latest scikit-learn. #319

Merged
merged 2 commits into from
Sep 5, 2024
Merged

Update developer docs to ensure compatibility with latest scikit-learn. #319

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
64286cf
updated developer documentation to install latest sklearn for compata…
ryanhausen Aug 26, 2024
3b10af5
restore semicolon that was replaced with a period accidently
ryanhausen Aug 26, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
8 changes: 6 additions & 2 deletions DEVELOPING.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -44,6 +44,10 @@ If you are developing locally, you will need the build dependencies to compile t

pip install -r build_requirements.txt

Additionally, you need to install the latest build of scikit-learn:

pip install --force -r build_sklearn_requirements.txt

Other requirements can be installed as such:

pip install .
Expand Down Expand Up @@ -132,7 +136,7 @@ You can also do the same thing using Meson/Ninja itself. Run the following to bu
export PYTHONPATH=${PWD}/build/lib/python<YOUR_PYTHON_VERSION>/site-packages

# to check installation, you need to be in a different directory
cd docs;
cd docs;
python -c "from treeple import tree"
python -c "import sklearn; print(sklearn.__version__);"

Expand Down Expand Up @@ -188,7 +192,7 @@ GH Actions will build wheels for each Python version and OS. Then the wheels nee
<https://github.com/neurodata/treeple/actions/workflows/build_wheels.yml> will have all the wheels for common OSes built for each Python version.

2. Upload wheels to test PyPi
This is to ensure that the wheels are built correctly and can be installed on a fresh environment. For more information, see <https://packaging.python.org/guides/using-testpypi/>. You will need to follow the instructions to create an account and get your API token for testpypi and pypi.
This is to ensure that the wheels are built correctly and can be installed on a fresh environment. For more information, see <https://packaging.python.org/guides/using-testpypi/>. You will need to follow the instructions to create an account and get your API token for testpypi and pypi.

```
twine upload dist/* --repository testpypi
Expand Down
3 changes: 3 additions & 0 deletions build_sklearn_requirements.txt
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -0,0 +1,3 @@
--pre
--extra-index https://pypi.anaconda.org/scientific-python-nightly-wheels/simple
scikit-learn
Loading