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This wiki contains information about:

A. Installation

Description of all the packages/software needed to run this code.

B. fMRI/Anat Data Pre-processing

Description of all notebooks and bash scripts involved in the pre-processing of the anatomical and functional scans. This section also includes information about which scans were discarded during pre-processing.

C. Atlas Preparation and FC Computation

Description of how to prepare the 200 Schaefer atlas for this project and how to compute static functional connectivity matrices per scan.

D. SNYCQ Analysis

E. Online resources related to the project

F. Project Notes