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1. alpha-gfn alpha-gfn Public

   A deep reinforcement learning framework for generating formulaic alpha factors for quantitative investment, powered by GFlowNet, implemented in Python&PyTorch.

   Jupyter Notebook 27 5

2. vmrseq vmrseq Public

   An R package for detecting cell-to-cell variably methylated regions (VMRs) from single-cell bisulfite sequencing leveraging probabilistic models.

   R 7

3. decemedip decemedip Public

   An R package for deconvoluting cell types in bulk-tissue/cell-free MeDIP-seq data leveraging a Bayesian hierarchical model. Depends on RStan.

   C++

4. rsna-2024 rsna-2024 Public

   Lumbar spine degenerative detection and classification on MRI scans via computer vision models. Solution to Kaggle challenge RSNA 2024 Lumbar Spine Degenerative Classification.

   Jupyter Notebook 2

5. multimodal-cell-matching multimodal-cell-matching Public

   Solution to one of the problems in 2021 NeurIPS Competition: A self-supervised contrastive learning model to learn matched cell modality embeddings in 10X Multiome data. Implemented in Python&PyTorch.

   Jupyter Notebook 2