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    14 repositories

    • apex

      Public
      C++
      •1•0•1•0•Updated Jul 21, 2023Jul 21, 2023

    • COVID-data-cleaning

      Public
      R
      •
      GNU General Public License v3.0
      •1•4•0•0•Updated Mar 10, 2023Mar 10, 2023

    • COVID19-Rt

      Public
      R
      •
      GNU General Public License v3.0
      •1•6•0•0•Updated May 27, 2022May 27, 2022

    • COVID19-Viz

      Public
      Visualization of COVID-19 spread metrics.
      rshinyappcovid19covid19-graphvisualizationrshiny
      R
      •
      GNU General Public License v3.0
      •3•11•0•0•Updated Apr 15, 2022Apr 15, 2022

    • MERMAID

      Public
      Multilevel Epidemic Regression Model to Account for Incomplete Data
      R
      •0•1•0•0•Updated Sep 21, 2021Sep 21, 2021

    • COVID-Health-Disparities

      Public
      R
      •0•2•0•0•Updated Apr 27, 2021Apr 27, 2021

    • iSKAT-GESAT

      Public
      GESAT/iSKAT tests for ZxE (gene-environment interactions), after accounting for main effects of Z (gene), main effects of E (environment) and X (covariates).
      R
      •2•2•0•0•Updated Oct 5, 2019Oct 5, 2019

    • GMMAT

      Public
      R package for GMMAT (Generalized Linear Mixed Model Association Test)
      C++
      •1•0•1•0•Updated Oct 29, 2018Oct 29, 2018

    • CEPSKAT

      Public
      CEPSKAT extends the SKAT framework to the setting of continuous extreme phenotype samples.
      R
      •0•0•0•0•Updated Oct 26, 2017Oct 26, 2017

    • GMMAT_lite

      Public
      A light version of GMMAT which does not depend on the C++ library boost
      C++
      •1•0•0•0•Updated Oct 26, 2017Oct 26, 2017

    • GHC

      Public
      R package for Generalized Higher Criticism
      R
      •0•0•0•0•Updated Oct 26, 2017Oct 26, 2017

    • coxKM

      Public
      R package for conducting SNP-set association tests for right-censored survival outcomes based on a kernel machine cox regression framework.
      R
      •2•1•0•0•Updated Oct 25, 2017Oct 25, 2017

    • SKAT

      Public
      Functions for kernel-regression-based association tests including Burden test, SKAT and SKAT-O. These methods aggregate individual SNP score statistics in a SNP set and efficiently compute SNP-set level p-values.
      R
      •1•2•0•0•Updated Oct 25, 2017Oct 25, 2017

    • MetaSKAT

      Public
      MetaSKAT is a R package for multiple marker meta-analysis across studies.
      R
      •3•1•0•0•Updated Oct 25, 2017Oct 25, 2017