v0.9.6-alpha

Quick fix for a speed bottleneck in freqmers module.

v0.9.5

Use yakat vclusters to optionally output more complete set of unclustered/unprocessed sequences.
Also allow disabling of in-cluster, in-sample non-conflicting sequences merging

v0.9.4

Use yakat vclusters to output unvarying clusters for greedy, multi-k assembly

kmerlocate bugs and cleanup

• including kmerlocate prototype
• bug fixes
• code cleanup

With a linux executable

• Self contained linux executable build: ant jar
• Bug fix #1
• More informative error message of empty input
• Updated documentation

Run either of the binaries: ./yakat or java -jar yakat.jar

Bug fix in snpmers module

v0.9.1

Merge branch 'master' of github.com:rsuchecki/yakat

First public release

After downloading, run

java -jar yakat.jar