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Fix doctest
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eachanjohnson committed Mar 19, 2024
1 parent b375d5a commit 380a818
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion crispio/map.py
Original file line number Diff line number Diff line change
Expand Up @@ -304,7 +304,7 @@ def as_gff(self,
>>> for gff in gl.as_gff(gff_defaults=dict(seqid='my_seq', source='here', feature='protospacer')): # doctest: +NORMALIZE_WHITESPACE
... print(gff)
...
my_seq here protospacer 23 42 . + . ID=sgr-06a4ba9b;Name=42-united_exodus;guide_context_down=ATATATATATATAATATATA;guide_context_up=ATATATATATATATATATAT;guide_length=20;guide_re_sites=;guide_sequence=ATACCGTTTTTTTAAAAAAA;guide_sequence_hash=a3987295;mnemonic=united_exodus;pam_end=45;pam_replichore=L;pam_search=NGG;pam_sequence=CGG;pam_start=42;source_name=42-united_exodus my_seq here protospacer 29 48 . - . ID=sgr-f84d1c6a;Name=25-zigzag_state;guide_context_down=TATATATATATATATATATA;guide_context_up=ATATATATATTATATATATA;guide_length=20;guide_re_sites=;guide_sequence=TATCCGTTTTTTTAAAAAAA;guide_sequence_hash=188c9ee6;mnemonic=zigzag_state;pam_end=28;pam_replichore=R;pam_search=CCN;pam_sequence=CCG;pam_start=25;source_name=25-zigzag_stat
my_seq here protospacer 23 42 . + . ID=sgr-06a4ba9b;Name=42-united_exodus;guide_context_down=ATATATATATATAATATATA;guide_context_up=ATATATATATATATATATAT;guide_length=20;guide_re_sites=;guide_sequence=ATACCGTTTTTTTAAAAAAA;guide_sequence_hash=a3987295;mnemonic=united_exodus;pam_end=45;pam_replichore=L;pam_search=NGG;pam_sequence=CGG;pam_start=42;source_name=42-united_exodus
my_seq here protospacer 29 48 . - . ID=sgr-f84d1c6a;Name=25-zigzag_state;guide_context_down=TATATATATATATATATATA;guide_context_up=ATATATATATTATATATATA;guide_length=20;guide_re_sites=;guide_sequence=TATCCGTTTTTTTAAAAAAA;guide_sequence_hash=188c9ee6;mnemonic=zigzag_state;pam_end=28;pam_replichore=R;pam_search=NGG;pam_sequence=CGG;pam_start=25;source_name=25-zigzag_state
"""

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