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Detailled the --split_4D
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frheault committed Sep 4, 2024
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6 changes: 4 additions & 2 deletions scripts/scil_lesions_generate_nawm.py
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neighboring a lesion. It is used to compute metrics in the white matter
surrounding lesions.
This script will generate concentric rings around the lesions, with the rings
This script will generate concentric rings around the lesions, with the rings
going from 2 to nb_ring + 2, with the lesion being 1.
The optional mask is used to compute the rings only in the mask
region. This can be useful to avoid useless computation.
If the lesion_atlas is binary, the output will be 3D. If the lesion_atlas
is a label map, the output will be 4D, with each label having its own NAWM.
is a label map, the output will be either:
- 4D, with each label having its own NAWM.
- 3D, if using --split_4D and saved into a folder as multiple 3D files.
"""

import argparse
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