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Releases: sgkit-dev/vcztools

Recommended bugfix release

04 Apr 14:46
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Important bugfixes for filtering language and sample subsetting.

All users are recommended to upgrade ASAP.

Filtering mini-language

Clarify the implementation status of the filtering mini-lanuage in view/query. Version 0.0.1 contained several data-corrupting bugs, including incorrect missing data handling (#163), incorrect matching on FILTER (#164) and CHROM (#178) columns, and incorrect per-sample filtering in query (#179). These issues have been resolved by raising informative errors on aspects of the query language that are not implemented correctly.

The filtering mini-language now consists of arbitrary arithmetic expressions on 1-dimensional fields.

Sample subsetting

Add support for specifying samples via -s/-S options

Initial release

05 Feb 14:45
0bc8da0
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0.0.1

0.0.1

0.0.1a3

05 Feb 13:09
8b32a3e
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0.0.1a3 Pre-release
Pre-release

Alpha pre-release for testing

Alpha pre-release for testing

14 Jan 15:47
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Pre-release

Early pre-release for testing.