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Pull requests: single-cell-data/TileDB-SOMA

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Pull requests list

[python] Improve null-index handling in Arrow dictionaries [RFC]
#3992 opened Apr 17, 2025 by johnkerl Loading…
Check all numerical dimensions of fragment for overlap
#3991 opened Apr 17, 2025 by XanthosXanthopoulos • Draft
[c++,python] Add ManagedQuery.submit_batch for global-order write
#3983 opened Apr 15, 2025 by nguyenv Loading…
1
[python] Timestamp-test for #3958
#3960 opened Apr 10, 2025 by ryan-williams • Draft
[python] Update setuptools
#3953 opened Apr 10, 2025 by teo-tsirpanis Loading…
2
[c++] Optimize nnz computation backport release-1.16
#3898 opened Apr 2, 2025 by XanthosXanthopoulos Loading…
1
5
[python] Add cell and transcript ingestion for Xenium
#3893 opened Apr 2, 2025 by XanthosXanthopoulos Loading…
14
[r] Replace tiledb::domain() with Rcpp c_domain() r-api
#3854 opened Mar 26, 2025 by mojaveazure Loading…
2
[c++/r/python] Update error messages (DRAFT)
#3843 opened Mar 25, 2025 by jp-dark • Draft
1
[c++,python] Pass timestamp when creating ArraySchema
#3836 opened Mar 21, 2025 by nguyenv • Draft
[python] Support user-specified obs/var index columns from ExperimentAxisQuery.to_anndata [WIP]
#3779 opened Mar 14, 2025 by XanthosXanthopoulos • Draft
1
[r] [WIP] Replace TileDB* base classes with SOMA* base classes r-api
#3771 opened Mar 13, 2025 by mojaveazure • Draft
[c++/python] Add support for binary column
#3745 opened Feb 27, 2025 by XanthosXanthopoulos Loading…
2
[python] Prototype Dask-backed to_anndata
#3740 opened Feb 26, 2025 by ryan-williams Loading…
74
[docs] Example of proposed encoding specification (WIP)
#3707 opened Feb 18, 2025 by jp-dark • Draft
1
[python] Enhance Arrow-to-Pandas nullability conveyance for .to_pandas() output [WIP]
#3645 opened Jan 30, 2025 by johnkerl • Draft
1
[r] [WIP] Remove tiledb-r as a dependency from tiledbsoma-r r-api
#3644 opened Jan 30, 2025 by mojaveazure • Draft
1
[python] tiledbsoma.io.add_obs_layer helper function
#3625 opened Jan 24, 2025 by maarten-devries Loading…
3
[python] Geometry DataFrame
#3297 opened Nov 6, 2024 by XanthosXanthopoulos Loading…
5
[r] Query conditions for timestamps [WIP]
#3163 opened Oct 11, 2024 by johnkerl • Draft
[c++] Test core PR 5260 [WIP] [skip ci]
#2940 opened Aug 28, 2024 by johnkerl • Draft
[python] Full Windows pre-push CI matrix
#1962 opened Dec 6, 2023 by johnkerl • Draft
@teo-tsirpanis
2
[r] Implement as generics for SOMASparseNDArrayReader
#1458 opened Jun 7, 2023 by pablo-gar Loading…
20
[r] [RFC] Add SOMASparseNDArray$read_spam_matrix() r-api
#1367 opened May 11, 2023 by mojaveazure Loading…
6
[r] [WIP] Port to_seurat() to SOMAExperiment r-api
#1261 opened Apr 18, 2023 by mojaveazure • Draft
21
ProTip! Updated in the last three days: updated:>2025-04-16.