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A TBProfiler output parser. Please contact support@theiagen.com or sage.wright@theiagen.com with any questions.

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tbp-parser

NOT FOR DIAGNOSTIC USE

CAUTION: The information produced by this program should not be used for clinical reporting unless and until extensive validation has occured in your laboratory on a stable version. Otherwise, the outputs of tbp-parser are for research use only.

Overview

This repository contains the tbp-parser tool which parses the JSON output of Jody Phelan's TB-Profiler tool. Available as a downloadable Python package and as a Docker image, tbp-parser converts the output of TB-Profiler into four files.

Please reach out to us at support@theiagen.com if you would like any custom file formats and/or changes to these output files that suit your individual needs.

Please see our full documentation here.