bowtie2
Here are 30 public repositories matching this topic...
WebAssembly modules for genomics
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Sep 18, 2024 - HTML
Detecting contamination in NGS data and multi-species analysis
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Sep 20, 2024 - HTML
Bioconductor package: an R wrapper for Bowtie2 and AdapterRemoval
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Feb 24, 2023 - C++
Here we are going to discuss variant calling on human datasets using GATK Best practices pipeline
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Jan 17, 2024 - Shell
Snakemake pipeline for Popoolation and Popoolation2
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Apr 26, 2024 - Perl
🦠Research project in Bioinformatics Institute 2023-2024
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Aug 16, 2024 - Jupyter Notebook
This is a repository for a seminar on Bowtie2 and its use of the Burrows-Wheeler Transform and FM-index in short-read sequence mapping.
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Oct 30, 2023 - Python
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Dec 21, 2019 - Jupyter Notebook
Some scripts to make your bioinformatics analyses reproducible and a bit easy 🤓
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Jun 6, 2021 - Shell
RNA-seq code with Bowtie alignment and generating strain-specific counts using Emase
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Apr 4, 2022 - HTML
nextflow ATACseq pipeline for GG02
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May 20, 2024 - Nextflow
Sequencing data preprocessing
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Jun 18, 2018 - R
Bowtie2 v2.5.2 Dockerfile Native for Apple M1+ Silicon (ARM64) and Intel/AMD (x86_64) Containers
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Dec 28, 2023 - Dockerfile
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