Comprehensive design of CRISPR gRNAs for nucleases and base editors
On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs
a guideRNA database generation tool
Collection of R packages that work in harmony for CRISPR gRNA design
CRISPR, faster, better – The Crackling method for whole-genome target detection
Tutorials for the crisprVerse
A guideRNA design tool for the modern era.
Visualization of CRISPR guide RNAs (gRNAs)
CRISPR Guide RNA Designer
Base functions and classes for CRISPR gRNA design
Useful human and mouse data for the crisprVerse ecosystem
A Snakemake workflow for the design of small guide RNAs (sgRNAs) for CRISPR applications.
Bowtie-based alignment of CRISPR gRNA spacer sequences
Shiny interface for CRISPR gRNAs designed with the crisprVerse
Pre-trained models for the crisprScore package
BWA-based alignment of CRISPR gRNA spacer sequences
Creates a construct developed by the Niles Lab at MIT, designed to deliver a 3' UTR post-transcriptional regulatory element payload to a specific given gene in Plasmodium falciparum.
ALLEGRO: An Algorithm Leveraging Linear Programing to Enhance Guide RNA Optimization
Fork of Azimuth (Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency), updated to work with Python 3.10+
⛓️ Automating construction of oligo library sequences for oligo array synthesis.
Add a description, image, and links to the crispr-design topic page so that developers can more easily learn about it.
To associate your repository with the crispr-design topic, visit your repo's landing page and select "manage topics."