Database of pairwise consensuses for miR-mRNA target interactions

Guide for the Baccarelli Lab GitHub

Repository for the R package RNAModR

Online version of tool is live

CatMOD is a CatBoost-based feature-concatenation model for RNA modification recognition from ONT DRS.

Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing

handful of tools that might be needed before or after HAMR

High-throughput Workflow for Processing and Analyzing RNA-Seq Data

Magnipore: Differential single nucleotide changes of ONT signals

Annotates modomics RNA sequences for easy viewing of RNA modifications and nucleotide positions.

Ultrafast bisulfite

A bundle of HAMRtools for High-throughput RNA modification prediction and analysis

🧪 New pipeline for detecting pseudouridine modification on RNA (BID-seq, etc)

Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing

High-throughput pipeline for modified mRNA annotation and long non-coding RNA annotation

🧪 Optimized protocol for m6A-SAC-seq

Analyse RNA feature distributions.

Base-conversion Sequencing Aligner