Analyse RNA feature distributions.

🧪 New pipeline for detecting pseudouridine modification on RNA (BID-seq, etc)

Ultrafast bisulfite

Repository for the R package RNAModR

Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing

A bundle of HAMRtools for High-throughput RNA modification prediction and analysis

High-throughput pipeline for modified mRNA annotation and long non-coding RNA annotation

🧪 Optimized protocol for m6A-SAC-seq

Annotates modomics RNA sequences for easy viewing of RNA modifications and nucleotide positions.

Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing

Magnipore: Differential single nucleotide changes of ONT signals

Guide for the Baccarelli Lab GitHub

Online version of tool is live

Base-conversion Sequencing Aligner

handful of tools that might be needed before or after HAMR

Database of pairwise consensuses for miR-mRNA target interactions

High-throughput Workflow for Processing and Analyzing RNA-Seq Data

CatMOD is a CatBoost-based feature-concatenation model for RNA modification recognition from ONT DRS.