affine gap penalty local alignment and affine gap penalty global alignment

math578 sequence alignment assignments

Clustering of time series.

Global Alignment for DNA/RNA/Protein Sequence. Needleman-Wunsch Algorithm. An Implementation in Web with Python and Flask Back-end

Weekly reports for the Summer Independent Course ECE-592 shall be uploaded here.

Java implementation of global alignment using a variation of Levenshteindistance. It takes first two sequences from fasta file and returns aligned sequences also in fasta format.

Pairwise Sequence Aligment Tool (PSAT) a simple application to align sequences.

Simple Needleman Wunsch Algorithm in C

A Python script that for a parameter k, calculates the universal alignment of 2 sequences, with limitation that the alignment contains at most k unknown nucleotides. Nucleotide sequences are sometimes written in a 5-character alphabet, A, T, G, C, and N where N stands for an undefined nucleotide.

Needleman-Wunsch Algorithm for global alignment and local alignment

C# implementation of Needleman-Wunsch global sequence alignment algorithm.

Project in Python language for Bioinformatics course starting october '20, aimed at implementing Needleman-Wunsh algorithm.

Algoritmos para el alineamiento de secuencias de ADN

Needleman-Wunsch Alignment in Go

Global and Local Sequence Alignment

Global and local DNA sequence alignment

Sequence alignment utilities for bioinformatics applications

Local and Global Alignment API