Merge pull request #65 from daikitag/speed-up

Speed up
tskit-dev · Aug 22, 2023 · 0b878f8 · 0b878f8
2 parents 1ce75ac + 83f2d6c
commit 0b878f8
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diff --git a/requirements/CI-complete/requirements.txt b/requirements/CI-complete/requirements.txt
@@ -5,4 +5,4 @@ pandas
 pytest==6.2.5
 pytest-cov==3.0.0
 scipy
-tskit==0.5.3
+tskit>=0.5.5
diff --git a/requirements/CI-tests-pip/requirements.txt b/requirements/CI-tests-pip/requirements.txt
@@ -3,4 +3,4 @@ numba
 numpy
 pandas
 scipy
-tskit==0.5.3
+tskit>=0.5.5
diff --git a/setup.cfg b/setup.cfg
@@ -47,9 +47,9 @@ keywords =
 packages = tstrait
 python_requires = >=3.8
 install_requires = 
-    numpy
+    numpy>=1.20.3
     numba>=0.57.0
-    pandas
+    pandas>=1.0
     tskit>=0.5.5
 setup_requires =
     setuptools_scm

diff --git a/tests/test_base.py b/tests/test_base.py
@@ -108,3 +108,4 @@ def test_non_decreasing(self):
             _check_non_decreasing([0, 1, 0], "array")
 
         _check_non_decreasing([0, 0, 1, 1, 4], "array")
+        _check_non_decreasing([0], "array")