Skip to content

Commit

Permalink
Add null model rationale
Browse files Browse the repository at this point in the history
Suggested by Per.
  • Loading branch information
hyanwong authored and Ben Jeffery committed Oct 2, 2023
1 parent e70bdb9 commit e4691f2
Showing 1 changed file with 6 additions and 1 deletion.
7 changes: 6 additions & 1 deletion simulation_overview.md
Original file line number Diff line number Diff line change
Expand Up @@ -26,7 +26,7 @@ Add links to papers that illustrate each of the following points
::::

Exploration
: Simulations allow us to explore the influence of various historical scenarios on
: Simulations allow us to explore the influence of complex historical scenarios on
observed patterns of genetic variation and inheritance.

Benchmarking and evaluating methodologies
Expand All @@ -39,6 +39,11 @@ Bayesian Computation). This is especially important in studies of complex demogr
where there are many potential parameters and models, making it impractical to specify
likelihood functions.

Compare to expectations
: It is often useful to compare data to what is expected under a simpler situation
(e.g. for use as a null model). For instance, comparison to *neutral* simulations
can be used to identify regions subject to selection.

There are two major forms of population genetic simulation: **forwards-time**
and **backwards-time**. In general, forwards-time simulation is detailed and more
realistic, while backwards-time simulation is fast and efficient.
Expand Down

0 comments on commit e4691f2

Please sign in to comment.