Popular repositories Loading

1. nl-rna-seq_wf nl-rna-seq_wf Public

   RNA-seq for rare diseases pipeline using nextflow

   Nextflow

2. ExpansionHunter ExpansionHunter Public

   Forked from Illumina/ExpansionHunter

   A tool for estimating repeat sizes

   C++

3. pipeline-align-DNA pipeline-align-DNA Public

   Forked from uclahs-cds/pipeline-align-DNA

   Nextflow pipeline to align paired DNA FASTQs and sort, mark duplicates, and index resulting alignment

   Nextflow

4. pipeline-recalibrate-BAM pipeline-recalibrate-BAM Public

   Forked from uclahs-cds/pipeline-recalibrate-BAM

   Nextflow pipeline to perform Indel Realignment and Base Quality Score Recalibration

   Nextflow

5. pipeline-call-gSNP pipeline-call-gSNP Public

   Forked from uclahs-cds/pipeline-call-gSNP

   Nextflow pipeline to call germline short variants using GATK

   Nextflow

6. pipeline-call-gSV pipeline-call-gSV Public

   Forked from uclahs-cds/pipeline-call-gSV

   Nextflow pipeline to call germline structural variants and copy number variants using DELLY and Manta

   Nextflow