Skip to content

Navigation Menu

Explore
By company size
By use case
By industry
View all solutions
Topics
- AI
- DevOps
- Security
- Software Development
- View all
Explore
- GitHub Sponsors
  Fund open source developers
- The ReadME Project
  GitHub community articles
Repositories
- Enterprise platform
  AI-powered developer platform
Available add-ons
Pricing

Search code, repositories, users, issues, pull requests...

Search

Clear

Search syntax tips

Provide feedback

We read every piece of feedback, and take your input very seriously.

Include my email address so I can be contacted

Saved searches

Use saved searches to filter your results more quickly

Name

Query

To see all available qualifiers, see our documentation.

You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window. Reload to refresh your session. You switched accounts on another tab or window. Reload to refresh your session.

Dismiss alert

varfish-org / mehari Public

Notifications You must be signed in to change notification settings
Fork 1
Star 16

Code
Issues 32
Pull requests 6
Actions
Security
Insights

Additional navigation options

Code
Issues
Pull requests
Actions
Security
Insights

fix: ensure FORMAT sample order is in-sync with header sample order#671

Merged

tedil merged 8 commits intomainvarfish-org/mehari:mainfrom 668-fix-sample-pedigree-ordervarfish-org/mehari:668-fix-sample-pedigree-orderCopy head branch name to clipboard

Jan 21, 2025

+73-6

Conversation Commits8 (8)Checks Files changed

Commits

Commits on Jan 21, 2025

fix: report samples in order of input vcf, not pedigree order
tedil
committed
cosmetic
tedil
committed
add FIXME for duplicate 'src' FORMAT entry
tedil
committed
fix: extract samples by name, so order is always in-sync with header
tedil
committed
unnecessary reference removed
tedil
committed
More informative error message
tedil
committed
add test for checking sample order does not change between in and output
tedil
committed
use same seed rng for consistent svuid
tedil
committed

Footer

© 2025 GitHub, Inc.

Footer navigation

Terms
Privacy
Security
Status
Docs
Contact

You can’t perform that action at this time.