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agmin Public
Forked from clindet/agminA comprehensive data mining and visualization framework for tabular aging features in clinical and omics assays.
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clindet Public
Forked from clindet/clindetA fully automated multi-omics data analysis pipeline based on Snakemake and singularity.
Python GNU General Public License v3.0 UpdatedMay 4, 2024 -
ASCAT.sc Public
Forked from VanLoo-lab/ASCAT.scHTML GNU General Public License v3.0 UpdatedMay 4, 2023 -
maftools Public
Forked from PoisonAlien/maftoolsSummarize, Analyze and Visualize MAF files from TCGA or in-house studies.
R MIT License UpdatedMar 29, 2023 -
battenberg Public
Forked from Wedge-lab/battenbergBattenberg R package for subclonal copynumber estimation
R GNU Affero General Public License v3.0 UpdatedFeb 21, 2023 -
CaVEMan Public
Forked from cancerit/CaVEManSNV expectation maximisation based mutation calling algorithm aimed at detecting somatic mutations in paired (tumour/normal) cancer samples. Supports both bam and cram format via htslib
C GNU Affero General Public License v3.0 UpdatedSep 12, 2022 -
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BRASS Public
Forked from cancerit/BRASSBreakpoints via assembly - Identifies breaks and attempts to assemble rearrangements in whole genome sequencing data.
Perl GNU Affero General Public License v3.0 UpdatedJul 12, 2020 -
read.wos.R Public
Forked from alberto-martin/read.wos.Rfunctions to read data exported from Web of Science into R
R UpdatedNov 6, 2019 -
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plmc Public
Forked from debbiemarkslab/plmcInference of couplings in proteins and RNAs from sequence variation
C MIT License UpdatedMay 23, 2018 -
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TRF2GFF Public
Forked from Adamtaranto/TRF2GFFConvert Tandem Repeat Finder dat file output into gff3 format
Python GNU General Public License v3.0 UpdatedSep 19, 2017 -
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Gource Public
Forked from acaudwell/Gourcesoftware version control visualization
C++ GNU General Public License v3.0 UpdatedApr 19, 2017 -
neuralart Public
Forked from kaishengtai/neuralartAn implementation of the paper 'A Neural Algorithm of Artistic Style'.
Lua MIT License UpdatedMar 5, 2017 -
ggplot port for python
Python BSD 2-Clause "Simplified" License UpdatedMar 3, 2017 -
design-resource Public
Forked from timmy3131/design-resourceA list of design resources.
UpdatedFeb 19, 2017 -
ribosome-profiling-analysis-framework Public
Forked from LUMC/ribosome-profiling-analysis-frameworkRibosome profiling analysis framework as described in de Klerk E., Fokkema I.F.A.C et al (2015). Alignment, triplet periodicity analysis, detecting ORFs.
PHP Other UpdatedDec 16, 2016