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Update README.md
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@johaGL
johaGL authored Feb 15, 2024
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Expand Up @@ -269,11 +269,11 @@ python3 -m tracegroomer --targetedMetabo_path ~/examples_TraceGroomer/data/examp
## The output

The output files are saved in the folder that
you specified in the config `.yml` file (`groom_out_path` field).
you specified in the config `.yml` file (`groom_out_path` field). The `data/[my_dataset]` location is recommended.
A total of 4 output files are generated if the absolute isotopologues are provided, otherwise 3 files are generated.


In this way we simply copy the entire `data/` content to the folder structure that we want to run with [DIMet](https://github.com/cbib/DIMet) !
In this way you simply copy the entire `data/` content to the folder structure that we want to run with [DIMet](https://github.com/cbib/DIMet) !

The format of these output files is tab-delimited .csv.

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