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Paleovirus Reference Sequences

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Robert J. Gifford edited this page Sep 20, 2024 · 4 revisions

We constructed consensus sequences for paleoviruses by aligning eHBV sequences derived from the same initial germline colonisation event—i.e. orthologs in distinct species, and paralogs that have arisen via intragenomic duplication.

Reference sequence data in tabular format are here.

Overview & Installation

  1. Home
  2. Background
  3. Requirements
  4. Installation

Core Project

  1. Database Schema Extensions
  2. Genome Features
  3. Sequence Data
  4. Reference Sequences
  5. Multiple Sequence Alignments
  6. Constrained Alignment Tree
  7. Phylogenetic Trees

EVE Extension Project

  1. Background
  2. Schema Extensions
  3. Sequences
  4. Reference Sequences
  5. Multiple Sequence Alignments
  6. Paleovirus Nomenclature
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