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Fix Asia weighted sampling #1150

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merged 4 commits into from
Sep 26, 2024
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@victorlin victorlin commented Aug 26, 2024

Description of proposed changes

Follow-up fixes to #1106. See commit messages.

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The temporal grouping attribute was changed from 'week' to 'year month'
inadvertently in "Use population-based weighted sampling for Asia
builds" (bc3f69e). Revert it back to 'week'.
This has been superseded by the following comment on country grouping
with population size weights.
The grouping information is not necessary here and became inaccurate
with the switch to country-based weighted sampling. It is only necessary
for other regions to distinguish
`nextstrain_region_grouped_by_country_*` from
`nextstrain_region_grouped_by_division_*`.
Follow-up to "Use population-based weighted sampling for Asia builds"
(bc3f69e) and subsequent fixes. Those were only applied to the open and
gisaid profiles, inadvertently skipping the gisaid-21L profile.
@victorlin victorlin self-assigned this Aug 26, 2024
@victorlin victorlin marked this pull request as ready for review August 27, 2024 00:39
@victorlin victorlin requested a review from trvrb August 30, 2024 18:37
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Looks great! Individual commits and commit messages are very clear.

@trvrb trvrb merged commit 85e0310 into master Sep 26, 2024
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@trvrb trvrb deleted the victorlin/fix-asia-weighted-sampling branch September 26, 2024 23:24
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2 participants