318 update for tes compliance #1026

Sign in to view logs

GitHub Actions / JUnit Test Report failed Sep 17, 2024 in 0s

1 tests run, 0 passed, 0 skipped, 1 failed.

Annotations

Check failure on line 1 in nf

github-actions / JUnit Test Report

nf.Parameters: --skip_fastq_download

Assertion failed: 

1 of 3 assertions failed

Raw output


            Nextflow stdout:

N E X T F L O W  ~  version 23.04.5
Launching `/home/runner/work/fetchngs/fetchngs/.nf-test-8438f5d91bc08a5f29f200962ac061dc.nf` [marvelous_cori] DSL2 - revision: 68dcf2aadf
Downloading plugin nf-validation@1.1.3
[3c/bd0712] Submitted process > SRA:SRA_IDS_TO_RUNINFO (DRX026011)
[70/235ff3] Submitted process > SRA:SRA_IDS_TO_RUNINFO (ERX1234253)
[09/69a99e] Submitted process > SRA:SRA_IDS_TO_RUNINFO (SRX6725035)
[49/ae7880] Submitted process > SRA:SRA_RUNINFO_TO_FTP (1)
[90/6eb25e] Submitted process > SRA:SRA_RUNINFO_TO_FTP (2)
[1b/14b72e] Submitted process > SRA:SRA_TO_SAMPLESHEET (ERX1234253_ERR1160846)
[06/2358ae] Submitted process > SRA:SRA_TO_SAMPLESHEET (DRX026011_DRR028935)
[89/6e3199] Submitted process > SRA:SRA_RUNINFO_TO_FTP (3)
[b5/40d560] Submitted process > SRA:SRA_TO_SAMPLESHEET (SRX6725035_SRR9984183)
[7f/bd1468] Submitted process > SRA:MULTIQC_MAPPINGS_CONFIG (1)
Nextflow stderr:

View more details on GitHub Actions