Troubleshooting

List of (common?) errors:

Problem: When running snakemake --use-conda I get UnsatisfiableError when setting up environments.

Answer: Removing the .condarc file solves the issue.

Problem: .eagle/bin/eagle-rc: error while loading shared libraries: libssl.so.1.1: cannot open shared object file: No such file or directory

Answer: libssl.so.1.1 is installed in the miniconda3/lib folder and export LD_LIBRARY_PATH=~/miniconda3/lib fixed the issue