Augustus is a highly customizable client designed to adapt to any anticheat, making it powerful for both PvP and HvH. It supports both blatant and legit modes, offers a lot of modules, and is compatible with versions 1.8.9 through 1.20 (via ViaVersion).

🔬🚀Prokaryotic gene prediction using Shine-Dalgarno motif and reading frame detection🧬🦠

Augustus is a highly customizable client designed to adapt to any anticheat, making it powerful for both PvP and HvH. It supports both blatant and legit modes, offers a lot of modules, and is compatible with versions 1.8.9 through 1.20 (via ViaVersion).

A comprehensive microbial genomic analysis pipeline that includes quality control, gene prediction, annotation, and comparative genomic analysis for identifying and visualizing key genetic features in microbial genomes.

MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics

A toolkit for identifying gene homologs in closely related species.

Deep learning based method called hist2RNA to predict the expression of genes using digital images of stained tissue samples

GeneValidator: Identify problems with predicted genes

ncRNA identification, annotation and functional prediction

Nextflow pipeline for genome annotation of protein-coding genes

The AugusMake pipeline is a Snakemake-based workflow for generating gene annotations using the Augustus software. AugusMake can perform gene predictions using any combination of the three methods: ab initio, with extrinsic hints, or by training a new species.

PredGenesGetPepts is an easy-to-use, beginner-friendly pipeline to call genes from fasta files, retrieve peptides and blasting them against a given protein database

Pogigwasc gene prediction of Loxodes magnus genome

Practical and home works in the discipline Bioinformatics.

Same species annotation lift over pipeline.

Python3 wrapper for parallelized gene prediction using Prodigal

Prediction of genes in genomes with ambiguous stop codons

iPat allows you to perform GWAS and GS with drags and clicks!