Highly Efficient Imaging Genetics (HEIG)

gwas workflow from raw intensity data to in-silico functional mapping

Analysis for the manuscript: 'Coral adaptation to climate change: Meta-analysis reveals high heritability across multiple traits', published in Global Change Biology

Code and simulations using interaction-LD score regression

Non-Additive LD Score Regression

Containerized workflow for analysis of human diabetic kidney disease by snRNA-seq and snATAC-seq

Sample code for ldsc analyses in UKBB

The project focused on the analysis of foxes from 3 different farms and the subsequent presentation of trait heritability results, genetic trends, breeding values and relationship matrix.

Code and Tutorials for Running the MArginal ePIstasis Test (MAPIT)

This repository includes scripts used in "Contribution of CRISPRable DNA on human complex traits"

Topological Learning for Brain Networks (Annals of Applied Statistics; MICCAI 2021)

This repository contains the R package ugnome which is a collection of utility functions for statistical genetic analyses.

BioTools is a repository that has many scripts which can be utilized to solve biological problems.

Heritability in plant breeding - R and SAS code examples

Regional Heritability Analysis is a software package for estimating regional heritability of small genomic segments.

A library for calculating penetrance tables of any bivariate epistasis model.

R package for wrangling and summarising 'animal' brms models

MultiVariate Polygenic Mixture Model

examples Python OOP