Inpactor2: LTR retrotransposon detector and classificator using Deep Learning
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Updated
Oct 1, 2024 - Jupyter Notebook
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plant-genomics
Here are 8 public repositories matching this topic...
An R package to identify plant transcription factors from protein sequence data and classify them in families
transcription-factors
plants
rstats
gene-families
hidden-markov-models
protein-domains
functional-genomics
plant-genomics
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Mar 14, 2023 - R
Data and code used in the Plant Genomes dashboard
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Mar 13, 2022 - R
Phylogenetic tree of LAR and other PIP family enzymes as shown in Güngör et al. 2020. This repository details all code and intermediate files used.
biology
open-data
open-science
orthologues
phylogeny
science-research
protein-evolution
open-notebook
plant-genetic-resources
plant-genomics
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Updated
Oct 6, 2020 - Jupyter Notebook
Phylogeny and classification of Azolla filiculoides MYB genes
transcription-factors
biology
open-data
open-science
phylogeny
science-research
protein-evolution
open-notebook
plant-genetic-resources
plant-genomics
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Updated
Feb 26, 2021 - HTML
NLR-Assembler is a command line tool for improving RenSeq Assemblies using linked-read sequencing by 10x Genomics.
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Updated
Aug 2, 2023 - Python
"植物基因组"(plantgenomes)微信公众号
bioinformatics
genomics
plant
weixin
wechat
genomes
plantgenomes
plantgenomics
plant-genomics
plant-genomes
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Updated
Jul 19, 2022
plant resistance gene miner for linking the resistance gene to genbank id.
bioinformatics
genome-annotation
genome-analysis
plant-genomics
plant-disease-detection
plant-resistance-genes
plant-diseaase-detection
plant-informatics
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Updated
Aug 21, 2024 - Python
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