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9 public repositories
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A Julia package to analyze protein sequences, structures, and evolutionary information
Updated
Oct 23, 2024
Julia
phylogenetic analyses informed by deep mutational scanning data
Updated
Jun 12, 2024
HTML
Use Thor's Axe to cut exons into their evolutionary building blocks ⚡
Updated
Jun 14, 2024
Python
A tool to model the evolution and structural impact of alternative splicing
Updated
Jun 21, 2022
Python
Exploring evolutionary protein fitness landscapes
Updated
Jul 17, 2020
Python
Phylogenetic tree of LAR and other PIP family enzymes as shown in Güngör et al. 2020. This repository details all code and intermediate files used.
Updated
Oct 6, 2020
Jupyter Notebook
Code-base for my ABC-selectivity paper in Current Biology
Updated
Apr 4, 2020
Jupyter Notebook
Phylogeny and classification of Azolla filiculoides MYB genes
Updated
Feb 26, 2021
HTML
This repo holds code for learning the language of phylogeny with MSA Transformer
Updated
Dec 26, 2024
Jupyter Notebook
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