Scripts to calculate sequence similarity networks (SSNs) and clustering of protein sequences.
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May 14, 2021 - R
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protein-clustering
Here are 9 public repositories matching this topic...
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Mar 2, 2019 - C++
A nextflow pipeline to cluster sets of proteins.
bioinformatics pipeline protein bioinformatics-pipeline effector protein-clustering protein-function-prediction
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Feb 11, 2020 - R
Scripts for clustering protein sequences, generating consensus sequences that represent a common representative of the cluster, and identifying representative medoid sequences for each cluster as the sequence most representing the cluster.
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Feb 6, 2025 - Jupyter Notebook
Protein Clustering
sequence-clustering linclust unsupervised-learning kmeans-clustering protein-clustering mmseqs2 evolutionary-scale-modeling
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Sep 9, 2022 - Jupyter Notebook
classification of human cdk2 conformations
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Jan 30, 2022 - Jupyter Notebook
Code and Data for Research Article
structural-biology computational-biology protein-stability protein-evolution protein-clustering protein-packing
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Nov 23, 2025 - Python
A nextflow pipeline to cluster sets of proteins.
bioinformatics pipeline protein bioinformatics-pipeline effector protein-clustering protein-function-prediction
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Apr 24, 2019 - Groovy
Analyzing protein sequences using classification and clustering method
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Nov 3, 2022 - Java
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