RNA-Seq Data Analysis in R: From Raw Counts to Differential Expression Analysis

Pipeline for generating RNAseq-based cancer patient reports

RNAseq Data Processing and Analysis Pipeline

Adjustments to bschiffthaler/ngs docker

RNA-seq for rare diseases pipeline using nextflow

This RNAseq data analysis tutorial is created for educational purpose

A comprehensive pipeline for RNAseq data analysis

iSofOrmS annoTAtoR pipeline

Snakemake workflow designed to perform RNASeq transcrpotime expression estimation with Salmon

R pipeline to process RNA seq data using Limma-Voom.

PISCES is a pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries using Salmon.

RNA-seq replication analysis.

A python package for working with inputs to and outputs from the toil-rnaseq pipeline

A book that discusses topics and contains tutorials relevant to population genomics

pilot pipeline that includes tool containerization

In this repository : i have created RNAseq pipeline using snakemake rules

Introduction to Bioinformatics workflows with Nextflow

Simple Snakemake RNA-Seq pipeline

Docker Integrated Comparison of Alternative Splicing (AS) Tools. Benchmarking AS tools and genomic alignment tools.

Pipeline for calling and analyzing variants from RNA-Seq data