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EVE Sequences
Robert J. Gifford edited this page Oct 11, 2024
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EVE sequences were recovered from whole genome sequence (WGS) assemblies via database-integrated genome screening (DIGS) using the DIGS tool.
All data pertaining to this screen are included in this repository.
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The complete list of vertebrate genomes screened can be found here.
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The complete list of invertebrate genomes screened can be found here.
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The set of parvovirus polypeptide sequences used as probes can be found here.
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The final set of parvovirus and EPV polypeptide sequences used as references can be found here.
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Input parameters for screening using the DIGS tool can be found here.
Parvovirus-GLUE by Robert J Gifford Lab.
For questions, issues, or feedback, please open an issue on the GitHub repository.
- Amdoparvovirus
- Dependoparvovirus
- Erythroparvovirus
- Protoparvovirus
- Copiparvovirus
- Tetraparvovirus
- Bocaparvovirus
- Aveparvovirus
- Chaphamaparvovirus
- Background
- Schema Extensions
- Sequence Data
- Reference Sequences
- Metadata
- Alignments
- Nomenclature
- Phylogenies
- Command Mode Reference
- Mode Non-Specific Commands
- Module Type Reference
- Related Publications
- ICTV Parvoviridae